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Methods:   Structural Analysis


*Purpose
:  To compare surface roughness heights determined with the LED scanner to the valuesderived from the contact probe

 

Species Investigated
Callicladium haldanianum
Campylium chrysophyllum
Dicranum scoparium
Hylocomium splendens
Leucobryum glaucum
Pleurozium schreberi
Polytrichum commune
Sphagnum fuscum
Bazzania trilobata

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Photo of boreal forest fieldsite in Essex County, NY


°All species were collected from forested habitats in Otsego and Essex counties in New York State during October 2003
 

Contact Probe Approach

(click here to see contact probe apparatus)

Measurement Procedure:
1) Canopy depths for a 5 x 5 cm area were measured at a minimum sample scale of 0.1 cm for a total of 223 sample points per canopy.

2) Canopy depths were detrended and subject to semivariance analysis
°Semivariance describes the average squared differences in depth at a given sampling scale (lag).  When semivariance is graphed as a function of lag, semivariance typically increases with lag to a maximum value and then plateaus.
3) Roughness height (Lr), a parameter defined previously by Rice et al. (2001), was calculated as the square root of twice the maximum semivariance.


Sample semivariance analysis      
for
Pleurozium schreberi                 

Max. semivariance = 24.2                
Lr = 6.96 mm                                  

CPsemivariance.jpg (8164 bytes)
 

LED Scanning Approach

(click here to see LED scanning apparatus)


Measurement procedure:
1) A 5.0 x 6.5 cm area of each canopy was scanned at a sample scale of 2.0 mm in the x-direction, resulting in a maximum of 10,920 depth points

2) For each image, a computer program designed for the project was applied to:
a) Identify the LED stripe
b) Transform (flatten) the image to correct for lens distortion
c)  Derive x, y, z coordinates for each point

3) Derived points were then converted to the roughness index, Lr


Sample semivariance analysis      
for
Pleurozium schreberi                 

Max. semivariance = 15.9              
Lr = 5.64 mm                                

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Laser Scanning Approach

(click here for the laser scanning appraatus)


Measurement Procedure:
1
) Light absorption in live bryophytes rendered the laser scanner unable to detect surfaces of live plants. To increase reflectance from the canopy surface, samples were lightly painted with a commercial flat white spray paint (#1520 Krylon paint, Sherwin-Williams, Cleveland, OH). This resulted in a 23 µm coating, which is smaller than the accuracy of the scanner.

2) A 3 x 3 cm area of each canopy was scanned with a Replica 3D scanner with  Reversa 25 optics hardware, resulting in a maximum of 13,077 depth points.

3) Derived points were then converted to the roughness index, Lr

Sample semivariance analysis      
for
Pleurozium schreberi                 

Max. semivariance = 15.3              
Lr = 5.64 mm                                

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